The detailed information of tRNA gene sequence


Sequence ID>WENV170018519
Genome IDBARW01031400
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 395
End posion on genome 306
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taactactgt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCTAAGGAGACGGTCTTGAAAACCGTTGTTCCCGTAAGGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttagtgaggt
Secondary structure (Cloverleaf model)
>WENV170018519	Ser	TGA
                   t      GCCA ttagtgaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TGTTCCCGTAAGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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