The detailed information of tRNA gene sequence


Sequence ID>WENV170018522
Genome IDBARW01032017
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 490
End posion on genome 583
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaagatgaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGTTCGCTTGGAGAGCGATTGGGCGGCCATAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttttaaaac
Secondary structure (Cloverleaf model)
>WENV170018522	Ser	GGA
                   a      GCCA gttttaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGCCATAAGCTGTCTC
                    T   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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