The detailed information of tRNA gene sequence


Sequence ID>WENV170018532
Genome IDBARW01035434
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 453
End posion on genome 379
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaacagagt
tRNA gene sequence 
AGCGGGGTAGAGCAGTGGTAGCTCGCGAGTGTCATGCGCTCGAGGTCGCAGGTTCGAATC
CTGCCCCCGCTACCA
Downstream region at tRNA end position 
ttcctgaaag
Secondary structure (Cloverleaf model)
>WENV170018532	Met	CAT
                   t      ACCA ttcctgaaag
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    T + G
                  G       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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