The detailed information of tRNA gene sequence


Sequence ID>WENV170018544
Genome IDBARW01036961
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 278
End posion on genome 356
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggttggggc
tRNA gene sequence 
GGGGTCGTGGTCGAGCTTGGTCTAAGATACGTGGCTTGGGTCCACGTGATCCCCGGTTCG
AATCCGGGCGACCCCACCA
Downstream region at tRNA end position 
tctcgttctt
Secondary structure (Cloverleaf model)
>WENV170018544	Pro	TGG
                   c      ACCA tctcgttctt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G G G C C     A
    T C G A        G      | | | | |     G
  T         G C T G       C C C G G     C
  G           | | +                 T T
  G         A G A T
    T C T A        A     TGATC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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