The detailed information of tRNA gene sequence


Sequence ID>WENV170018549
Genome IDBARW01037721
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 275
End posion on genome 200
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcgagaga
tRNA gene sequence 
TGCGAGATAGAGCAGTGGTTAGCTCGTCAGCCTCATAAGCTGAAGGTCGGAGGTTCAAAT
CCTCCTCTCGCTACCG
Downstream region at tRNA end position 
atataaaatg
Secondary structure (Cloverleaf model)
>WENV170018549	Met	CAT
                   a      ACCG atataaaatg
                     T   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C T C C     A
      T G A        A      | | | | |     A
    G       C G A G       G G A G G     C
    G       | | | |                 T T
    T       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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