The detailed information of tRNA gene sequence


Sequence ID>WENV170018563
Genome IDBBPD01000006
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 48722
End posion on genome 48632
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgccttgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tcaactttcc
Secondary structure (Cloverleaf model)
>WENV170018563	Ser	GGA
                   c      GCCA tcaactttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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