The detailed information of tRNA gene sequence


Sequence ID>WENV170018565
Genome IDBBPD01000009
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 36058
End posion on genome 35966
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagaagttct
tRNA gene sequence 
GGAGTGATGACCGAGAGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGTGTAGAGCC
GCATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
aataccccaa
Secondary structure (Cloverleaf model)
>WENV170018565	Ser	GCT
                   t      GCCA aataccccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGTGTAGAGCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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