The detailed information of tRNA gene sequence


Sequence ID>WENV170018573
Genome IDBBPD01000026
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 162844
End posion on genome 162917
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcttccgcgg
tRNA gene sequence 
GGCCCGATGGCGGAGTGGTTACGCAGAGGACTGCAAATCCTTGCACGCCGGTTCGATTCC
GGCTCGGGCCTCCA
Downstream region at tRNA end position 
ttcaccgtct
Secondary structure (Cloverleaf model)
>WENV170018573	Cys	GCA
                   g      TCCA ttcaccgtct
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G G C G       G C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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