The detailed information of tRNA gene sequence


Sequence ID>WENV170018607
Genome IDBBPD01000115
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 21219
End posion on genome 21309
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggtgaccacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGTACCTGACTCGAAATCAGGCGTACGTTCATAGCGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtacggcaaa
Secondary structure (Cloverleaf model)
>WENV170018607	Ser	CGA
                   c      GCCA gtacggcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    T       T T G T
      C G A        A     CGTACGTTCATAGCGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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