The detailed information of tRNA gene sequence


Sequence ID>WENV170018608
Genome IDBBPD01000115
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 24793
End posion on genome 24701
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcacgcgtgt
tRNA gene sequence 
GGACAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGGCTAAACCCC
GCTTCGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position 
cttcgaatgc
Secondary structure (Cloverleaf model)
>WENV170018608	Ser	GGA
                   t      GCCA cttcgaatgc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGCGGCTAAACCCCGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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