The detailed information of tRNA gene sequence


Sequence ID>WENV170018623
Genome IDBBPD01000157
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 11415
End posion on genome 11501
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacaggccc
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTTAAGGTGCCGCTCTCGAAAAGCGGTGTCATCTCTGGTGAC
CGTGGGTTCGAATCCCACCCCCTCCGCtt
Downstream region at tRNA end position 
tcgagcggct
Secondary structure (Cloverleaf model)
>WENV170018623	Ser	CGA
                   c      GCtt tcgagcggct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        G     TGTCATCTCTGGTGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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