The detailed information of tRNA gene sequence


Sequence ID>WENV170018645
Genome IDBBPD01000250
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 42133
End posion on genome 42048
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gcttggttct
tRNA gene sequence 
GGGTCGATGTCCGAGTGGTTAATGGAGGCGGACTGTAAATCCGCTGGCTTACGCCTACGC
TAGTTCGAATCTAGCTCGGCCCACCA
Downstream region at tRNA end position 
aaatctgccc
Secondary structure (Cloverleaf model)
>WENV170018645	Tyr	GTA
                   t      ACCA aaatctgccc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C G A T C     A
      T G A        G      | | | | |     G
    G       G C C T       G C T A G     C
    G       + | | |                 T T
    T       T G G A
      T A A        G     TGGCTTACGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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