The detailed information of tRNA gene sequence


Sequence ID>WENV170018652
Genome IDBBPD01000266
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 28910
End posion on genome 29000
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttgtgggt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCTGAACGGGCACGCCTGGAGAGCGTGTAGCCGATAAAATCGG
CTCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttggca
Secondary structure (Cloverleaf model)
>WENV170018652	Ser	GGA
                   t      GCCA gtttttggca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G G C C       C A G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TAGCCGATAAAATCGGCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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