The detailed information of tRNA gene sequence


Sequence ID>WENV170018657
Genome IDBBPD01000271
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 15321
End posion on genome 15397
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tccaaagtgc
tRNA gene sequence 
GCGGGCGTAGCTCAGTCGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCGCTCGCGCCA
Downstream region at tRNA end position 
ctttggaagg
Secondary structure (Cloverleaf model)
>WENV170018657	Asp	GTC
                   c      GCCA ctttggaagg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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