The detailed information of tRNA gene sequence


Sequence ID>WENV170018661
Genome IDBBPD01000281
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7320
End posion on genome 7229
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatggatgtg
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGCCGCCTGCTAAGCGGTTACCCTGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gaattggata
Secondary structure (Cloverleaf model)
>WENV170018661	Ser	GCT
                   g      GCCA gaattggata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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