The detailed information of tRNA gene sequence


Sequence ID>WENV170018680
Genome IDBBPD01000334
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13051
End posion on genome 12962
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgcagccgt
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGGTCACCCGT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aataccaatc
Secondary structure (Cloverleaf model)
>WENV170018680	Ser	TGA
                   t      GCCA aataccaatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGGTCACCCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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