The detailed information of tRNA gene sequence


Sequence ID>WENV170018696
Genome IDBBPD01000414
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 12195
End posion on genome 12271
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctctcggcgc
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTGTTCGGGACGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
gccggcggat
Secondary structure (Cloverleaf model)
>WENV170018696	Pro	CGG
                   c      ACCA gccggcggat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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