The detailed information of tRNA gene sequence


Sequence ID>WENV170018820
Genome IDBBPD01001229
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3564
End posion on genome 3489
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tccggcacaT
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCACCTGCATGGGGTGCAGGGGGTCGGAGGTTCAAA
TCCTCTCACCCCGATtt
Downstream region at tRNA end position 
ttgttggaag
Secondary structure (Cloverleaf model)
>WENV170018820	Pro	GGG
                   T      ATtt ttgttggaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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