The detailed information of tRNA gene sequence


Sequence ID>WENV170018838
Genome IDBBPD01001373
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 841
End posion on genome 764
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttggcat
tRNA gene sequence 
GCCGCCTTCGTCTAGGGGCTTAGGACATCTGCTTCTCAGGCAGAAGATTCGCGGGTTCGA
ATCCCGCAGGCGGCACAA
Downstream region at tRNA end position 
aaggataggg
Secondary structure (Cloverleaf model)
>WENV170018838	Glu	CTC
                   t      ACAA aaggataggg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     C G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      T T A        A     AGATTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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