The detailed information of tRNA gene sequence


Sequence ID>WENV170018850
Genome IDBBPD01001481
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 10
End posion on genome 86
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nccgccctgc
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGAG
ACCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tgggccgggc
Secondary structure (Cloverleaf model)
>WENV170018850	Trp	CCA
                   c      GCCA tgggccgggc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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