The detailed information of tRNA gene sequence


Sequence ID>WENV170018918
Genome IDBBPD01002078
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9038
End posion on genome 9114
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnntgcga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAA
TCCTCCCCCCGCTACCA
Downstream region at tRNA end position 
agtaaaatca
Secondary structure (Cloverleaf model)
>WENV170018918	Met	CAT
                   a      ACCA agtaaaatca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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