The detailed information of tRNA gene sequence


Sequence ID>WENV170018934
Genome IDBBPD01002255
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13428
End posion on genome 13518
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaagcctt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCTTCCTGCTAAGAAGTTAGAGGGTCAAAAGCT
CTCTCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
aagcaactat
Secondary structure (Cloverleaf model)
>WENV170018934	Ser	GCT
                   t      GCtc aagcaactat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGAGGGTCAAAAGCTCTCTC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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