The detailed information of tRNA gene sequence


Sequence ID>WENV170018948
Genome IDBBPD01002445
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 346
End posion on genome 255
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttgccccT
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCACCTGACTCGAAATCAGGAGTGGCGGTAACGTCA
TCGGGAGTTCGAATCTCCCCCTCTCCGTCC
Downstream region at tRNA end position 
Aaaattcgca
Secondary structure (Cloverleaf model)
>WENV170018948	Ser	CGA
                   T      GTCC Aaaattcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     AGTGGCGGTAACGTCATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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