The detailed information of tRNA gene sequence


Sequence ID>WENV170018969
Genome IDBBPD01002670
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 41180
End posion on genome 41268
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcactgtaca
tRNA gene sequence 
GGAGGGGTGACCGAGCGGTTGAAGGTGCACGCCTGGAACGCGTGTGTACGGTAAACGTAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tatcgcaatt
Secondary structure (Cloverleaf model)
>WENV170018969	Ser	GGA
                   a      GCCA tatcgcaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTACGGTAAACGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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