The detailed information of tRNA gene sequence


Sequence ID>WENV170019002
Genome IDBBPD01002930
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5506
End posion on genome 5431
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actactttgT
tRNA gene sequence 
GGGGCTGTGGCCTAGTCTGGAAGGGCAGCTGGCTCCAGACCAGCCGATCGTGGGTTCAAA
TCCTACCGGCCCCATtt
Downstream region at tRNA end position 
tacttcgtct
Secondary structure (Cloverleaf model)
>WENV170019002	Trp	CCA
                   T      ATtt tacttcgtct
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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