The detailed information of tRNA gene sequence


Sequence ID>WENV170019015
Genome IDBBPD01003060
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 91
End posion on genome 1
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaaataaa
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTATTGCGGCACACTGCTAATGTGCTATATGGGTAAAACC
GTATCGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019015	Ser	GCT
                   a      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G           | | |                 T T
  T         T T G C
    C T A          G     TATATGGGTAAAACCGTATC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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