The detailed information of tRNA gene sequence


Sequence ID>WENV170019028
Genome IDBBPD01003116
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 56935
End posion on genome 57010
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttccaccttt
tRNA gene sequence 
GGGGTCTTAGCTCATCTGGAAGAGCGTCCGCCTTGCAAGCGGGAGGCGGTCGGTTCGAGT
CCGACAGGCTCCACCA
Downstream region at tRNA end position 
ttctgaacgg
Secondary structure (Cloverleaf model)
>WENV170019028	Ala	TGC
                   t      ACCA ttctgaacgg
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     T - A          T G
                    T     C A G C C     A
      C T A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCG
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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