The detailed information of tRNA gene sequence


Sequence ID>WENV170019056
Genome IDBBPD01003426
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5492
End posion on genome 5568
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agagattcat
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGTTACGTTCACATCGTAAAGGCCAATGGTTCGAG
TCCATTCGTGCCCACCA
Downstream region at tRNA end position 
taaagaagga
Secondary structure (Cloverleaf model)
>WENV170019056	Val	CAC
                   t      ACCA taaagaagga
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T T A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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