The detailed information of tRNA gene sequence


Sequence ID>WENV170019100
Genome IDBBPD01003824
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 46735
End posion on genome 46827
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaggcacat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTCTAAGGCGCACGACTGGAAATCGTGTGTACGGCGAAAACC
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tcaacacgaa
Secondary structure (Cloverleaf model)
>WENV170019100	Ser	GGA
                   t      GCCA tcaacacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G A G G G     C
  G           | + |                 T T
  T         A G G C
    C T A          G     TGTACGGCGAAAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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