The detailed information of tRNA gene sequence


Sequence ID>WENV170019116
Genome IDBBPD01004146
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 408
End posion on genome 332
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgatatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTACGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTGGGTTCAAA
TCCCTCCCCCGCAACCA
Downstream region at tRNA end position 
ttaatttaag
Secondary structure (Cloverleaf model)
>WENV170019116	Met	CAT
                   t      ACCA ttaatttaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     A
    A       C G A G       G T G G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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