The detailed information of tRNA gene sequence


Sequence ID>WENV170019117
Genome IDBBPD01004146
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 318
End posion on genome 242
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttaagttt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCATTCGGTTCATACCCGAAGTGTCGGCGGTTCAAA
TCCGTCCGCCGCTACCA
Downstream region at tRNA end position 
ctagtaaata
Secondary structure (Cloverleaf model)
>WENV170019117	Met	CAT
                   t      ACCA ctagtaaata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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