The detailed information of tRNA gene sequence


Sequence ID>WENV170019118
Genome IDBBPD01004146
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 228
End posion on genome 153
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtaaatattc
tRNA gene sequence 
GGGCGCATAGCTCAGTCGGGAGAGCACCTGCCTTACAAGCAGGGGGTCGTAGGTTCGAGC
CCTACTGTGCCCACCA
Downstream region at tRNA end position 
gaaatatcaa
Secondary structure (Cloverleaf model)
>WENV170019118	Val	TAC
                   c      ACCA gaaatatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     A - T          C G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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