The detailed information of tRNA gene sequence


Sequence ID>WENV170019154
Genome IDBBPD01004909
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1714
End posion on genome 1806
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccactcctgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTAGAGGGGGATAACCC
CTCTCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
cctagacctt
Secondary structure (Cloverleaf model)
>WENV170019154	Ser	GCT
                   c      GCCA cctagacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAGAGGGGGATAACCCCTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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