The detailed information of tRNA gene sequence


Sequence ID>WENV170019155
Genome IDBBPD01004959
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4531
End posion on genome 4456
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atattgattt
tRNA gene sequence 
GCCCCGTTAGCTCAGTTGGTAGAGCAACTCCCTTTTAAGGAGAGGGTCGGGGGTTCGAAT
CCCTCACGGGGTACAA
Downstream region at tRNA end position 
cgcgttataa
Secondary structure (Cloverleaf model)
>WENV170019155	Lys	TTT
                   t      ACAA cgcgttataa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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