The detailed information of tRNA gene sequence


Sequence ID>WENV170019158
Genome IDBBPD01005081
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 595
End posion on genome 510
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tctactcgat
tRNA gene sequence 
GCCGGGGTGGCGGAATGGCAGACGCGACGGACTTAAAATCCGTTGAACCTTAAAGTTCGT
GCGGGTTCAAGTCCCGCCCCCGGTACtg
Downstream region at tRNA end position 
ttgcctcgat
Secondary structure (Cloverleaf model)
>WENV170019158	Leu	TAA
                   t      ACtg ttgcctcgat
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGAACCTTAAAGTTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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