The detailed information of tRNA gene sequence


Sequence ID>WENV170019161
Genome IDBBPD01005183
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3258
End posion on genome 3331
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gaaagaagaa
tRNA gene sequence 
GGGCACGTAGCTCAGGGGTAAGAGCATCCGTCTTATAAGCGGAAGGTCGGTGGTTCAATT
CCACCCGTGCCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019161	Ile	TAT
                   a      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     C C A C C     A
      G G A        A      | | | | |     A
    G       C T C G       G G T G G     C
    G       | | | |                 T T
    T       G A G C
      A A          A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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