The detailed information of tRNA gene sequence


Sequence ID>WENV170019162
Genome IDBBPD01005183
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1354
End posion on genome 1280
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cttttctcga
tRNA gene sequence 
GCCCTCGTAGTTCAAAGGATAGAACAATAGCCTTCTAAGCTGTGGATCTAGGTTCGATTC
CTAGCGAGGGCACCA
Downstream region at tRNA end position 
tggtgggcgt
Secondary structure (Cloverleaf model)
>WENV170019162	Arg	TCT
                   a      ACCA tggtgggcgt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G A T C C     A
      A A A        A      | | | | |     G
    G       C T T G       C T A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          A     GGAT
                    A - T
                    T + G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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