The detailed information of tRNA gene sequence


Sequence ID>WENV170019170
Genome IDBBPD01005265
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7396
End posion on genome 7481
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctggtcgttt
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
gcttgctcat
Secondary structure (Cloverleaf model)
>WENV170019170	Ser	TGA
                   t      GCCA gcttgctcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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