The detailed information of tRNA gene sequence


Sequence ID>WENV170019173
Genome IDBBPD01005311
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 23067
End posion on genome 23160
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaacatat
tRNA gene sequence 
GGAATCGTGGTAGAGAGGCCTATTACACTGGTTTGCTAAACCGGAGAATCATTGTGAGAT
GGGTCCGTGGGTTCGAATCCCACCGATTCTGCCA
Downstream region at tRNA end position 
atttagaaca
Secondary structure (Cloverleaf model)
>WENV170019173	Ser	GCT
                   t      GCCA atttagaaca
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G A T G       G T G G G     C
    G       + | | |                 T T
    C       T T A C
      C T A        A     AGAATCATTGTGAGATGGGTCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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