The detailed information of tRNA gene sequence


Sequence ID>WENV170019202
Genome IDBBPD01005916
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 185
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagtggatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGA
ATCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>WENV170019202	Met	CAT
                   t      ACCA aattattttt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        G      + | | | |     G
  T         C G A G       G C A G G     C
  G         | | | |                 T T
  G         G C T C
    T T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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