The detailed information of tRNA gene sequence


Sequence ID>WENV170019213
Genome IDBBPD01006135
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 35
End posion on genome 112
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aattattcat
tRNA gene sequence 
CGGGGAGTGGCTCAGTTTGGCTAGAGCGCAACGTTCGGGACGTTGAGGTCGGCGGTTCAA
ATCCGCCCTTCCCGACCA
Downstream region at tRNA end position 
atctaaatat
Secondary structure (Cloverleaf model)
>WENV170019213	Pro	CGG
                   t      ACCA atctaaatat
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     C C G C C     A
    T T G A        G      | | | | |     A
  T         C T C G       G G C G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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