The detailed information of tRNA gene sequence


Sequence ID>WENV170019216
Genome IDBBPD01006192
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 403
End posion on genome 480
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatttaatgg
tRNA gene sequence 
GGGGACGTAGTTCAGTTGGTCCAGAACGTCGGACTGTCGATCCGAAGGTCGCGGGTTCGA
GCCCCGTCGTCCCCGCCA
Downstream region at tRNA end position 
gttgacttaa
Secondary structure (Cloverleaf model)
>WENV170019216	Asp	GTC
                   g      GCCA gttgacttaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  G         C T T G       G C G G G     C
  G         | | | |                 T T
  T         G A A C
    C C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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