The detailed information of tRNA gene sequence


Sequence ID>WENV170019223
Genome IDBBPD01006342
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 18613
End posion on genome 18690
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taagattttt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTTGGTCAGAACGCTAGCCTGTCACGCTAGAGGTCGAGGGTTCGA
ACCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
aaattttatg
Secondary structure (Cloverleaf model)
>WENV170019223	Asp	GTC
                   t      GCCA aaattttatg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C A
                    T     T T C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G A G G G     C
  G         | | | |                 T T
  G         G A A C
    T C A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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