The detailed information of tRNA gene sequence


Sequence ID>WENV170019232
Genome IDBBPD01006370
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4284
End posion on genome 4194
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaatccgtc
tRNA gene sequence 
GGAGAGGTACCGAAGTTGGTCATAACGGCGCTGTTTCGAAAACAGTTGGTCCTTTTTAGG
GGCACGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019232	Ser	CGA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  G           | | |                 T T
  T         A C G G
    C A T A        C     TGGTCCTTTTTAGGGGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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