The detailed information of tRNA gene sequence


Sequence ID>WENV170019243
Genome IDBBPD01006528
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 18162
End posion on genome 18237
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaatttac
tRNA gene sequence 
GGGCCTTTAGCTCAATGGTCAGAGCAACCGGCTCATAACCGGTCGGTTCGGGGTTCGAGT
CCCTGAAGGCCCACCA
Downstream region at tRNA end position 
caagtcagtc
Secondary structure (Cloverleaf model)
>WENV170019243	Met	CAT
                   c      ACCA caagtcagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     CGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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