The detailed information of tRNA gene sequence


Sequence ID>WENV170019250
Genome IDBBPD01006682
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2064
End posion on genome 2155
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgccattttt
tRNA gene sequence 
GGAGCTGTAGCCTAATGGTAAGGCATCCGTTTCGAAAACGGACGTTACCCCCCAAAGGGG
TATTGGGGGTTCGAGCCCCTCCAGCTCCGCCA
Downstream region at tRNA end position 
acttgttggg
Secondary structure (Cloverleaf model)
>WENV170019250	Ser	CGA
                   t      GCCA acttgttggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     T C C G       G G G G G     C
      G     | | | |                 T T
      G     A G G C
        T A        A     CGTTACCCCCCAAAGGGGTATT
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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