The detailed information of tRNA gene sequence


Sequence ID>WENV170019256
Genome IDBBPD01006825
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5499
End posion on genome 5427
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catcagacaa
tRNA gene sequence 
GGGGTTATGGGGTAACCTGGTAGCCTGCGAGCTTTGGGAGCTTGTGATTCCGGTTCAAAT
CCGGATAACCCCAtag
Downstream region at tRNA end position 
ggtgtcgcct
Secondary structure (Cloverleaf model)
>WENV170019256	Pro	TGG
                   a      Atag ggtgtcgcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T          T A
                    T     A G G C C     A
      C A A        G      | | | | |     A
    C       T G G G       T C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        G     TGAT
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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