The detailed information of tRNA gene sequence


Sequence ID>WENV170019257
Genome IDBBPD01006848
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 111
End posion on genome 26
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccacaagaa
tRNA gene sequence 
GGAGGGTTGCGATAATGGCTATTCGGCTGGTTTCGAAAACCAGTGGGAGAAATCCCTTGC
AGGTTCGAGTCCTGCACCCTCCGCCA
Downstream region at tRNA end position 
gtcaggattt
Secondary structure (Cloverleaf model)
>WENV170019257	Ser	CGA
                   a      GCCA gtcaggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C G T C C     A
      T A A        G      | | | | |     G
    G       T A G C       G C A G G     C
    G         | | |                 T T
    C       T T C G
      T A          G     TGGGAGAAATCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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