The detailed information of tRNA gene sequence


Sequence ID>WENV170019259
Genome IDBBPD01006859
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1224
End posion on genome 1300
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcccggctca
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCAACGGAATCATAATCCGCAGGTCCGGGGTTCGAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
gcaccgcaag
Secondary structure (Cloverleaf model)
>WENV170019259	Met	CAT
                   a      ACCA gcaccgcaag
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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