The detailed information of tRNA gene sequence


Sequence ID>WENV170019267
Genome IDBBPD01007161
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 629
End posion on genome 553
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaaagacta
tRNA gene sequence 
CGGGGTGTAGCTCAGTCCGGGAGAGCACCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAG
TCCTGTCACCCCTGCCA
Downstream region at tRNA end position 
agaagaaagg
Secondary structure (Cloverleaf model)
>WENV170019267	Trp	CCA
                   a      GCCA agaagaaagg
                     C   T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        A     AGGTC
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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